Authoritative and practical, Plant Genotyping: Methods and Protocols offers researchers the opportunity to update their knowledge and choose the most suitable method of plant genotyping for their chosen application.

The first concentrated on the mechanisms that generate genomic diversity in plants, with a particular emphasis on transposable elements and polyploidy, while the second and third sessions were devoted to the evolution of plant phenotypes in wild and domesticated species, and to domestication and plant improvement processes, respectively.

2022年5月17日 · We present the advantages and disadvantages of explainable model structures, discuss the potential of machine learning models for genotype to phenotype prediction in crop breeding, and the challenges, including the scarcity of high-quality datasets, inconsistent metadata annotation and the requirements of ML models.

2024年4月8日 · Here we comprehensively evaluate eight such genotypers in different scenarios in terms of variant type and size, sequencing parameters, genomic context, and complexity, as well as graph size, using both simulated and real data sets from representative plant genomes.

2022年3月14日 · Plant transformation and regeneration remain highly species- and genotype-dependent. Conventional hormone-based plant regeneration via somatic embryogenesis or organogenesis is tedious, time-consuming, and requires specialized skills and experience. Over the last 40 years, significant advances have …

Over the past decade, advances in plant genotyping have been critical in enabling the identification of genetic diversity, in understanding evolution, and in dissecting important traits in both crops and native plants. The widespread popularity of single-nucleotide polymorphisms (SNPs) has prompted …

2022年3月29日 · What is a plant genotype? The genotype is an organism's genetic makeup, or its genetic blueprint. A genotype contains the precise genes necessary to run an organism, much as the code behind a software program holds the information essential to run the program.

2023年6月14日 · In this article, we review the molecular basis and applications of developmental regulatory genes and nanoparticles in plant transformation and discuss how to further promote genotype-independent plant transformation.

Plant phenotypes and studied agronomic traits as well as identified genes or genomic regions were associated with modifications in the plant architecture. Additionally, plant density and grain yield traits, including flowering time and time from anthesis to silking, showed high heritability and were more common for the BSSS(R)C17 DH lines.

2023年5月23日 · As plants are not static, but constantly growing and developing on a daily basis, our study aims to make genotype-to-phenotype connections using time-series growth data across multiple scales (intra- and inter-day data), genotypes, and growth conditions.