BioChatter can be adapted to specific research areas to pull data from biomedical databases and literature. Further, instructing LLMs to use external software via the BioChatter API-calling ...

Large language models (LLMs) have transformed how many of us work, from supporting content creation and coding to improving search engines. However, the lack of transparency, reproducibility, and ...

BioChatter is an open-source Python framework for deploying LLMs ... Head of Research at EMBL’s European Bioinformatics Institute (EMBL-EBI), and Professor on leave at Heidelberg University.

The python script used to perform these preprocessing steps and the size of each genome, before and after applying the script, are provided in Supplementary Table S4 in Supplementary Material.